Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFEP18615 PHKG1P2-201ENST00000457537 863 ntBASIC15.2■□□□□ 0.02
NELFEP18615 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFEP18615 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NELFEP18615 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.2■□□□□ 0.02
NELFEP18615 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NELFEP18615 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFEP18615 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.2■□□□□ 0.02
NELFEP18615 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.2■□□□□ 0.02
NELFEP18615 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NELFEP18615 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NELFEP18615 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NELFEP18615 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 PCDHA3-202ENST00000532566 4594 ntBASIC15.2■□□□□ 0.02
NELFEP18615 REXO1L1P-202ENST00000608646 1974 ntBASIC15.2■□□□□ 0.02
NELFEP18615 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NELFEP18615 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NELFEP18615 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NELFEP18615 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 AL512384.1-201ENST00000406683 331 ntBASIC15.19■□□□□ 0.02
NELFEP18615 AC074338.1-201ENST00000416825 156 ntBASIC15.19■□□□□ 0.02
NELFEP18615 AC098850.1-201ENST00000419919 790 ntBASIC15.19■□□□□ 0.02
NELFEP18615 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.19■□□□□ 0.02
NELFEP18615 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NELFEP18615 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NELFEP18615 CTBP2P3-201ENST00000585629 1255 ntBASIC15.19■□□□□ 0.02
NELFEP18615 TMEM261P1-201ENST00000604899 340 ntBASIC15.19■□□□□ 0.02
NELFEP18615 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.19■□□□□ 0.02
NELFEP18615 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.19■□□□□ 0.02
NELFEP18615 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.19■□□□□ 0.02
NELFEP18615 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFEP18615 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NELFEP18615 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFEP18615 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.19■□□□□ 0.02
NELFEP18615 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NELFEP18615 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.19■□□□□ 0.02
NELFEP18615 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFEP18615 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFEP18615 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NELFEP18615 AC087481.3-201ENST00000602886 1894 ntBASIC15.18■□□□□ 0.02
NELFEP18615 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NELFEP18615 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NELFEP18615 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NELFEP18615 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NELFEP18615 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms