Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.78■□□□□ 0.28
SMPD1P17405 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 MAGEA5-201ENST00000446757 942 ntBASIC16.78■□□□□ 0.28
SMPD1P17405 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 RPS2P36-201ENST00000456516 831 ntBASIC16.78■□□□□ 0.28
SMPD1P17405 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 PRKXP1-201ENST00000561423 1122 ntBASIC16.78■□□□□ 0.28
SMPD1P17405 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.78■□□□□ 0.28
SMPD1P17405 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.78■□□□□ 0.28
SMPD1P17405 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 SPCS2P2-201ENST00000603270 608 ntBASIC16.78■□□□□ 0.28
SMPD1P17405 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 AC244517.3-201ENST00000616254 1235 ntBASIC16.78■□□□□ 0.28
SMPD1P17405 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.78■□□□□ 0.28
SMPD1P17405 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMPD1P17405 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.78■□□□□ 0.28
SMPD1P17405 LILRP1-201ENST00000444199 1370 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SMPD1P17405 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SMPD1P17405 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SMPD1P17405 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SMPD1P17405 MBLAC2-202ENST00000514906 1936 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 AC099398.1-201ENST00000567919 2776 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.77■□□□□ 0.28
SMPD1P17405 RN7SKP214-201ENST00000364208 315 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SMPD1P17405 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SMPD1P17405 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.77■□□□□ 0.28
SMPD1P17405 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.77■□□□□ 0.28
SMPD1P17405 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 FAM58BP-201ENST00000439056 645 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 AL596276.2-201ENST00000447525 331 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMPD1P17405 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.77■□□□□ 0.28
SMPD1P17405 AC103988.2-201ENST00000561804 725 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.77■□□□□ 0.28
SMPD1P17405 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.77■□□□□ 0.28
SMPD1P17405 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.77■□□□□ 0.28
SMPD1P17405 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.77■□□□□ 0.28
SMPD1P17405 AL132994.2-201ENST00000603120 687 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.77■□□□□ 0.28
SMPD1P17405 AC006058.4-201ENST00000624016 1670 ntBASIC16.77■□□□□ 0.28
SMPD1P17405 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SMPD1P17405 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMPD1P17405 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMPD1P17405 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMPD1P17405 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMPD1P17405 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
SMPD1P17405 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMPD1P17405 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.77■□□□□ 0.27
SMPD1P17405 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMPD1P17405 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMPD1P17405 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMPD1P17405 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMPD1P17405 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMPD1P17405 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SMPD1P17405 AP000845.1-201ENST00000581677 2131 ntBASIC16.76■□□□□ 0.27
SMPD1P17405 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
SMPD1P17405 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMPD1P17405 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMPD1P17405 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMPD1P17405 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.76■□□□□ 0.27
SMPD1P17405 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SMPD1P17405 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SMPD1P17405 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMPD1P17405 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SMPD1P17405 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMPD1P17405 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMPD1P17405 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms