Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 KRT8P22-201ENST00000562317 1415 ntBASIC13.34□□□□□ -0.27
CCL2P13500 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL2P13500 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL2P13500 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL2P13500 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CCL2P13500 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.34□□□□□ -0.27
CCL2P13500 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL2P13500 AL596325.1-201ENST00000563991 1082 ntBASIC13.34□□□□□ -0.27
CCL2P13500 SAMD11P1-201ENST00000571429 661 ntBASIC13.34□□□□□ -0.27
CCL2P13500 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.34□□□□□ -0.27
CCL2P13500 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 AC105233.6-201ENST00000642093 218 ntBASIC13.34□□□□□ -0.27
CCL2P13500 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 AGAP7P-201ENST00000582299 2062 ntBASIC13.34□□□□□ -0.27
CCL2P13500 AGAP14-201ENST00000624701 2060 ntBASIC13.34□□□□□ -0.27
CCL2P13500 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL2P13500 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 LINC00528-201ENST00000600723 2160 ntBASIC13.34□□□□□ -0.27
CCL2P13500 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.33□□□□□ -0.27
CCL2P13500 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.33□□□□□ -0.27
CCL2P13500 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CCL2P13500 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL2P13500 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CCL2P13500 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.33□□□□□ -0.27
CCL2P13500 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CCL2P13500 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CCL2P13500 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL2P13500 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL2P13500 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 AC007787.1-201ENST00000588095 1583 ntBASIC13.33□□□□□ -0.28
CCL2P13500 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL2P13500 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCL2P13500 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL2P13500 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL2P13500 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 AC004066.1-201ENST00000502488 802 ntBASIC13.33□□□□□ -0.28
CCL2P13500 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.33□□□□□ -0.28
CCL2P13500 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL2P13500 AC093813.1-201ENST00000605066 256 ntBASIC13.33□□□□□ -0.28
CCL2P13500 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.33□□□□□ -0.28
CCL2P13500 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 REXO1L5P-201ENST00000622260 2098 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms