Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 REXO1L4P-201ENST00000605109 1937 ntBASIC13.9□□□□□ -0.18
HMGN1P05114 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGN1P05114 AC015656.1-201ENST00000624209 3578 ntBASIC13.9□□□□□ -0.18
HMGN1P05114 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGN1P05114 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
HMGN1P05114 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGN1P05114 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
HMGN1P05114 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGN1P05114 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.9□□□□□ -0.18
HMGN1P05114 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.9□□□□□ -0.18
HMGN1P05114 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGN1P05114 MTND6P24-201ENST00000440466 518 ntBASIC13.9□□□□□ -0.18
HMGN1P05114 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGN1P05114 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.9□□□□□ -0.18
HMGN1P05114 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.9□□□□□ -0.18
HMGN1P05114 AC025181.2-201ENST00000606994 802 ntBASIC13.9□□□□□ -0.18
HMGN1P05114 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HMGN1P05114 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGN1P05114 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HMGN1P05114 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGN1P05114 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGN1P05114 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.9□□□□□ -0.18
HMGN1P05114 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGN1P05114 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMGN1P05114 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMGN1P05114 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HMGN1P05114 Z97205.2-201ENST00000564697 1639 ntBASIC13.9□□□□□ -0.19
HMGN1P05114 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.9□□□□□ -0.19
HMGN1P05114 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HMGN1P05114 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HMGN1P05114 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
HMGN1P05114 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HMGN1P05114 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGN1P05114 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HMGN1P05114 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.89□□□□□ -0.19
HMGN1P05114 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
HMGN1P05114 AC138969.3-201ENST00000546612 1459 ntBASIC13.89□□□□□ -0.19
HMGN1P05114 AC138932.2-201ENST00000548268 1459 ntBASIC13.89□□□□□ -0.19
HMGN1P05114 AC126755.4-201ENST00000549796 1459 ntBASIC13.89□□□□□ -0.19
HMGN1P05114 AC018529.2-202ENST00000611482 3087 ntBASIC13.89□□□□□ -0.19
HMGN1P05114 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.89□□□□□ -0.19
HMGN1P05114 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HMGN1P05114 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.89□□□□□ -0.19
HMGN1P05114 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGN1P05114 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.89□□□□□ -0.19
HMGN1P05114 FDX1P1-201ENST00000449115 551 ntBASIC13.89□□□□□ -0.19
HMGN1P05114 SERBP1P3-201ENST00000459980 809 ntBASIC13.89□□□□□ -0.19
HMGN1P05114 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HMGN1P05114 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.89□□□□□ -0.19
HMGN1P05114 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGN1P05114 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.89□□□□□ -0.19
HMGN1P05114 AC022145.2-201ENST00000598203 171 ntBASIC13.89□□□□□ -0.19
HMGN1P05114 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.89□□□□□ -0.19
HMGN1P05114 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HMGN1P05114 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
HMGN1P05114 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGN1P05114 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.89□□□□□ -0.19
HMGN1P05114 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HMGN1P05114 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
HMGN1P05114 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGN1P05114 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.88□□□□□ -0.19
HMGN1P05114 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGN1P05114 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGN1P05114 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.88□□□□□ -0.19
HMGN1P05114 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGN1P05114 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.88□□□□□ -0.19
HMGN1P05114 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HMGN1P05114 AC074338.1-201ENST00000416825 156 ntBASIC13.88□□□□□ -0.19
HMGN1P05114 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms