Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.84□□□□□ -0.35
SIX6O95475 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SIX6O95475 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.84□□□□□ -0.35
SIX6O95475 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 DUX4L26-201ENST00000489078 1255 ntBASIC12.84□□□□□ -0.35
SIX6O95475 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.84□□□□□ -0.35
SIX6O95475 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.84□□□□□ -0.35
SIX6O95475 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.84□□□□□ -0.35
SIX6O95475 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.84□□□□□ -0.35
SIX6O95475 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.84□□□□□ -0.35
SIX6O95475 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 AL078644.1-201ENST00000609881 752 ntBASIC12.84□□□□□ -0.35
SIX6O95475 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 AC015909.5-201ENST00000624336 2266 ntBASIC12.84□□□□□ -0.35
SIX6O95475 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 AC084364.1-201ENST00000551967 1556 ntBASIC12.84□□□□□ -0.35
SIX6O95475 AL023775.1-201ENST00000454907 1746 ntBASIC12.84□□□□□ -0.35
SIX6O95475 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.84□□□□□ -0.35
SIX6O95475 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.84□□□□□ -0.35
SIX6O95475 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SIX6O95475 PEG13-201ENST00000631594 5667 ntBASIC12.84□□□□□ -0.35
SIX6O95475 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
SIX6O95475 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.83□□□□□ -0.35
SIX6O95475 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SIX6O95475 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.83□□□□□ -0.35
SIX6O95475 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SIX6O95475 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
SIX6O95475 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SIX6O95475 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SIX6O95475 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SIX6O95475 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.83□□□□□ -0.36
SIX6O95475 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SIX6O95475 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.83□□□□□ -0.36
SIX6O95475 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SIX6O95475 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.83□□□□□ -0.36
SIX6O95475 PHKG1P2-201ENST00000457537 863 ntBASIC12.83□□□□□ -0.36
SIX6O95475 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.83□□□□□ -0.36
SIX6O95475 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SIX6O95475 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.83□□□□□ -0.36
SIX6O95475 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms