Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SNX4O95219 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.46□□□□□ -0.09
SNX4O95219 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.46□□□□□ -0.09
SNX4O95219 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 COX20P2-201ENST00000452636 358 ntBASIC14.46□□□□□ -0.09
SNX4O95219 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.46□□□□□ -0.09
SNX4O95219 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SNX4O95219 HNRNPUP1-201ENST00000554987 333 ntBASIC14.46□□□□□ -0.09
SNX4O95219 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.46□□□□□ -0.09
SNX4O95219 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
SNX4O95219 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
SNX4O95219 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX4O95219 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNX4O95219 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.46□□□□□ -0.09
SNX4O95219 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.46□□□□□ -0.1
SNX4O95219 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX4O95219 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX4O95219 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX4O95219 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX4O95219 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.46□□□□□ -0.1
SNX4O95219 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX4O95219 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX4O95219 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.46□□□□□ -0.1
SNX4O95219 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.46□□□□□ -0.1
SNX4O95219 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.45□□□□□ -0.1
SNX4O95219 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 AC005252.3-201ENST00000623855 2258 ntBASIC14.45□□□□□ -0.1
SNX4O95219 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SNX4O95219 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.45□□□□□ -0.1
SNX4O95219 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 RPL13P2-201ENST00000440687 659 ntBASIC14.45□□□□□ -0.1
SNX4O95219 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.45□□□□□ -0.1
SNX4O95219 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 TPRX2P-201ENST00000535362 881 ntBASIC14.45□□□□□ -0.1
SNX4O95219 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
SNX4O95219 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX4O95219 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SNX4O95219 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX4O95219 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX4O95219 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms