Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CSPG5O95196 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CSPG5O95196 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG5O95196 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CSPG5O95196 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CSPG5O95196 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG5O95196 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.42■□□□□ 0.22
CSPG5O95196 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CSPG5O95196 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.42■□□□□ 0.22
CSPG5O95196 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.42■□□□□ 0.22
CSPG5O95196 NKAIN1P1-201ENST00000435754 582 ntBASIC16.42■□□□□ 0.22
CSPG5O95196 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.42■□□□□ 0.22
CSPG5O95196 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CSPG5O95196 FGFR3P5-201ENST00000564496 886 ntBASIC16.42■□□□□ 0.22
CSPG5O95196 MIR4706-201ENST00000582134 82 ntBASIC16.42■□□□□ 0.22
CSPG5O95196 AC097724.1-201ENST00000609581 426 ntBASIC16.42■□□□□ 0.22
CSPG5O95196 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CSPG5O95196 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CSPG5O95196 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CSPG5O95196 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CSPG5O95196 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG5O95196 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG5O95196 AC105917.1-201ENST00000506637 2539 ntBASIC16.42■□□□□ 0.22
CSPG5O95196 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.41■□□□□ 0.22
CSPG5O95196 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CSPG5O95196 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 HSPB1P2-201ENST00000448722 546 ntBASIC16.41■□□□□ 0.22
CSPG5O95196 SPTLC1P5-201ENST00000450718 252 ntBASIC16.41■□□□□ 0.22
CSPG5O95196 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.41■□□□□ 0.22
CSPG5O95196 CHMP4BP1-201ENST00000556017 588 ntBASIC16.41■□□□□ 0.22
CSPG5O95196 AC005730.2-201ENST00000564549 1184 ntBASIC16.41■□□□□ 0.22
CSPG5O95196 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.41■□□□□ 0.22
CSPG5O95196 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.41■□□□□ 0.22
CSPG5O95196 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 AC007663.3-201ENST00000609632 465 ntBASIC16.41■□□□□ 0.22
CSPG5O95196 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.41■□□□□ 0.22
CSPG5O95196 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.41■□□□□ 0.22
CSPG5O95196 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG5O95196 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 KRT8P4-201ENST00000509735 1454 ntBASIC16.41■□□□□ 0.22
CSPG5O95196 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CSPG5O95196 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.4■□□□□ 0.22
CSPG5O95196 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 AC022188.1-201ENST00000620960 1664 ntBASIC16.4■□□□□ 0.22
CSPG5O95196 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.4■□□□□ 0.22
CSPG5O95196 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CSPG5O95196 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.4■□□□□ 0.22
CSPG5O95196 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.4■□□□□ 0.22
CSPG5O95196 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms