Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 EEF1DP4-201ENST00000446006 880 ntBASIC13.53□□□□□ -0.24
KDM4BO94953 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.53□□□□□ -0.24
KDM4BO94953 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
KDM4BO94953 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.53□□□□□ -0.24
KDM4BO94953 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 POLD2P1-201ENST00000511220 997 ntBASIC13.53□□□□□ -0.24
KDM4BO94953 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.53□□□□□ -0.24
KDM4BO94953 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.53□□□□□ -0.24
KDM4BO94953 LINC01230-201ENST00000625222 3017 ntBASIC13.53□□□□□ -0.24
KDM4BO94953 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.53□□□□□ -0.24
KDM4BO94953 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.53□□□□□ -0.24
KDM4BO94953 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
KDM4BO94953 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.53□□□□□ -0.24
KDM4BO94953 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KDM4BO94953 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KDM4BO94953 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.53□□□□□ -0.24
KDM4BO94953 INTS4P1-203ENST00000641008 3683 ntBASIC13.53□□□□□ -0.24
KDM4BO94953 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KDM4BO94953 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.53□□□□□ -0.24
KDM4BO94953 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDM4BO94953 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KDM4BO94953 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
KDM4BO94953 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDM4BO94953 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
KDM4BO94953 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
KDM4BO94953 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.52□□□□□ -0.24
KDM4BO94953 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.52□□□□□ -0.24
KDM4BO94953 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDM4BO94953 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDM4BO94953 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.52□□□□□ -0.24
KDM4BO94953 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDM4BO94953 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDM4BO94953 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
KDM4BO94953 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDM4BO94953 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDM4BO94953 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.52□□□□□ -0.24
KDM4BO94953 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 AL022342.1-201ENST00000400363 863 ntBASIC13.52□□□□□ -0.25
KDM4BO94953 HTR5BP-201ENST00000430851 1154 ntBASIC13.52□□□□□ -0.25
KDM4BO94953 AL592309.1-201ENST00000443127 649 ntBASIC13.52□□□□□ -0.25
KDM4BO94953 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.52□□□□□ -0.25
KDM4BO94953 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KDM4BO94953 AC069335.1-201ENST00000489972 472 ntBASIC13.52□□□□□ -0.25
KDM4BO94953 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.52□□□□□ -0.25
KDM4BO94953 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.52□□□□□ -0.25
KDM4BO94953 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.52□□□□□ -0.25
KDM4BO94953 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.52□□□□□ -0.25
KDM4BO94953 SLC25A39P2-201ENST00000537614 270 ntBASIC13.52□□□□□ -0.25
KDM4BO94953 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.52□□□□□ -0.25
KDM4BO94953 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
KDM4BO94953 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 KRT8P37-201ENST00000451609 1420 ntBASIC13.52□□□□□ -0.25
KDM4BO94953 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.52□□□□□ -0.25
KDM4BO94953 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.52□□□□□ -0.25
KDM4BO94953 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 UXT-AS1-201ENST00000590504 1525 ntBASIC13.52□□□□□ -0.25
KDM4BO94953 AP3S2-216ENST00000617003 1561 ntBASIC13.52□□□□□ -0.25
KDM4BO94953 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.52□□□□□ -0.25
KDM4BO94953 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.52□□□□□ -0.25
KDM4BO94953 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.52□□□□□ -0.25
KDM4BO94953 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.52□□□□□ -0.25
KDM4BO94953 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
KDM4BO94953 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KDM4BO94953 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDM4BO94953 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
KDM4BO94953 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms