Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CPNE3O75131 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CPNE3O75131 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.76□□□□□ -0.05
CPNE3O75131 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE3O75131 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE3O75131 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE3O75131 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CPNE3O75131 DRD5P1-201ENST00000456605 1438 ntBASIC14.76□□□□□ -0.05
CPNE3O75131 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CPNE3O75131 SBF1P1-201ENST00000444527 5631 ntBASIC14.76□□□□□ -0.05
CPNE3O75131 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CPNE3O75131 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.76□□□□□ -0.05
CPNE3O75131 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE3O75131 AC012441.1-201ENST00000446669 685 ntBASIC14.76□□□□□ -0.05
CPNE3O75131 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CPNE3O75131 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CPNE3O75131 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.76□□□□□ -0.05
CPNE3O75131 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE3O75131 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.76□□□□□ -0.05
CPNE3O75131 MIR4313-201ENST00000580760 101 ntBASIC14.76□□□□□ -0.05
CPNE3O75131 MIR4259-201ENST00000584466 101 ntBASIC14.76□□□□□ -0.05
CPNE3O75131 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.76□□□□□ -0.05
CPNE3O75131 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE3O75131 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.76□□□□□ -0.05
CPNE3O75131 AC107373.2-201ENST00000607735 490 ntBASIC14.76□□□□□ -0.05
CPNE3O75131 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 AC006058.4-201ENST00000624016 1670 ntBASIC14.76□□□□□ -0.05
CPNE3O75131 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CPNE3O75131 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.76□□□□□ -0.05
CPNE3O75131 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE3O75131 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CPNE3O75131 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CPNE3O75131 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 AC134312.5-201ENST00000568031 1313 ntBASIC14.75□□□□□ -0.05
CPNE3O75131 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CPNE3O75131 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
CPNE3O75131 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
CPNE3O75131 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CPNE3O75131 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 ANKRD19P-201ENST00000338192 862 ntBASIC14.75□□□□□ -0.05
CPNE3O75131 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.75□□□□□ -0.05
CPNE3O75131 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.75□□□□□ -0.05
CPNE3O75131 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.75□□□□□ -0.05
CPNE3O75131 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.75□□□□□ -0.05
CPNE3O75131 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.75□□□□□ -0.05
CPNE3O75131 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.75□□□□□ -0.05
CPNE3O75131 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.75□□□□□ -0.05
CPNE3O75131 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CPNE3O75131 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE3O75131 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CPNE3O75131 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE3O75131 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CPNE3O75131 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE3O75131 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CPNE3O75131 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms