Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 AGAP7P-201ENST00000582299 2062 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 AGAP14-201ENST00000624701 2060 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
NACAE9PAV3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 AL353705.2-201ENST00000428243 662 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 AC241585.1-201ENST00000433527 519 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 TARDBPP1-201ENST00000442013 1203 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.29□□□□□ -0.6
NACAE9PAV3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.29□□□□□ -0.6
NACAE9PAV3 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.29□□□□□ -0.6
NACAE9PAV3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.29□□□□□ -0.6
NACAE9PAV3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 AC007967.4-201ENST00000614700 386 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
NACAE9PAV3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
NACAE9PAV3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.29□□□□□ -0.6
NACAE9PAV3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.29□□□□□ -0.6
NACAE9PAV3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
NACAE9PAV3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.29□□□□□ -0.6
NACAE9PAV3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.28□□□□□ -0.6
NACAE9PAV3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
NACAE9PAV3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.28□□□□□ -0.6
NACAE9PAV3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.28□□□□□ -0.6
NACAE9PAV3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
NACAE9PAV3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 MIR346-201ENST00000362234 95 ntBASIC11.28□□□□□ -0.6
NACAE9PAV3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.28□□□□□ -0.6
NACAE9PAV3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.28□□□□□ -0.6
NACAE9PAV3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
NACAE9PAV3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
NACAE9PAV3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.28□□□□□ -0.6
NACAE9PAV3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.28□□□□□ -0.6
NACAE9PAV3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.28□□□□□ -0.6
NACAE9PAV3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
NACAE9PAV3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
NACAE9PAV3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.28□□□□□ -0.6
NACAE9PAV3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.28□□□□□ -0.6
NACAE9PAV3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.28□□□□□ -0.6
NACAE9PAV3 AC022144.1-201ENST00000602255 1580 ntBASIC11.28□□□□□ -0.6
NACAE9PAV3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
NACAE9PAV3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
NACAE9PAV3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.28□□□□□ -0.6
NACAE9PAV3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
NACAE9PAV3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NACAE9PAV3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms