Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MRPS18AP1-201ENST00000414458 589 ntBASIC12.33□□□□□ -0.44
SRRM4A7MD48 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AC007191.1-201ENST00000623179 2995 ntBASIC12.33□□□□□ -0.44
SRRM4A7MD48 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 AL157414.3-201ENST00000624276 1954 ntBASIC12.32□□□□□ -0.44
SRRM4A7MD48 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 AL512638.1-201ENST00000457493 794 ntBASIC12.32□□□□□ -0.44
SRRM4A7MD48 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 AC104794.3-201ENST00000566840 1248 ntBASIC12.32□□□□□ -0.44
SRRM4A7MD48 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 AL360270.3-201ENST00000609118 1348 ntBASIC12.32□□□□□ -0.44
SRRM4A7MD48 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRRM4A7MD48 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.32□□□□□ -0.44
SRRM4A7MD48 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 LILRP1-201ENST00000444199 1370 ntBASIC12.31□□□□□ -0.44
SRRM4A7MD48 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SRRM4A7MD48 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SRRM4A7MD48 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms