Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 PCDHA1-201ENST00000378133 2726 ntBASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3BA6NDS4 AC026691.1-201ENST00000602502 2017 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 AC104457.1-201ENST00000401024 814 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 SLC25A24P2-201ENST00000415059 510 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 AC091804.1-201ENST00000486888 567 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 SCARNA20.5-201ENST00000516991 142 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 AC126915.1-201ENST00000522847 1038 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 AC007663.3-201ENST00000609632 465 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 AC138028.6-201ENST00000616106 1482 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 AL157414.3-201ENST00000624276 1954 ntBASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3BA6NDS4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 CLUHP2-201ENST00000426660 1303 ntBASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AL360270.3-201ENST00000609118 1348 ntBASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 598.8 ms