Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV3S1A0A5B6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
TCRBV3S1A0A5B6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TCRBV3S1A0A5B6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.31□□□□□ -0.12
TCRBV3S1A0A5B6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV3S1A0A5B6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 AC243562.1-201ENST00000560672 389 ntBASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 TCAM1P-207ENST00000485295 1537 ntBASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRBV3S1A0A5B6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 AL591122.2-201ENST00000624125 1853 ntBASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 RN7SL589P-201ENST00000481268 310 ntBASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 BANF1P1-201ENST00000553684 263 ntBASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms