Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 AC015802.1-201ENST00000588104 1449 ntBASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV18A0A075B6X5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AL137784.3-201ENST00000623858 2288 ntBASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AC107918.4-201ENST00000641966 3141 ntBASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AL359881.3-201ENST00000602640 1721 ntBASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 IGHV3-22-201ENST00000520721 359 ntBASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AC138969.3-201ENST00000546612 1459 ntBASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AC138932.2-201ENST00000548268 1459 ntBASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AC126755.4-201ENST00000549796 1459 ntBASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 AC012508.2-201ENST00000567613 1472 ntBASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV18A0A075B6X5 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 MBLAC2-202ENST00000514906 1936 ntBASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms