Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 SSR4P1-203ENST00000599569 2260 ntBASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGA9Q9Y5G4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGA9Q9Y5G4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGA9Q9Y5G4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGA9Q9Y5G4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.33□□□□□ -0.11
PCDHGA9Q9Y5G4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.33□□□□□ -0.11
PCDHGA9Q9Y5G4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGA9Q9Y5G4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGA9Q9Y5G4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 MIR326-201ENST00000362220 95 ntBASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 ZNF767P-206ENST00000513792 565 ntBASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 AL118558.3-201ENST00000607414 1079 ntBASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGA9Q9Y5G4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 AC006486.2-201ENST00000624246 2199 ntBASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms