Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AC105233.2-201ENST00000523697 349 ntBASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AF228730.5-201ENST00000530288 346 ntBASIC14.51□□□□□ -0.09
AP4S1Q9Y587 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 MIR3652-201ENST00000579335 131 ntBASIC14.51□□□□□ -0.09
AP4S1Q9Y587 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AC023141.13-201ENST00000604991 943 ntBASIC14.51□□□□□ -0.09
AP4S1Q9Y587 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 TP73-AS1-207ENST00000624167 988 ntBASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AL358472.4-201ENST00000633140 710 ntBASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AC007064.4-201ENST00000637740 555 ntBASIC14.51□□□□□ -0.09
AP4S1Q9Y587 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 COL6A4P2-202ENST00000504443 2753 ntBASIC14.51□□□□□ -0.09
AP4S1Q9Y587 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 AC099521.3-201ENST00000624251 2938 ntBASIC14.51□□□□□ -0.09
AP4S1Q9Y587 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.51□□□□□ -0.09
AP4S1Q9Y587 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 RNA5SP410-201ENST00000516285 106 ntBASIC14.5□□□□□ -0.09
AP4S1Q9Y587 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 LINC01711-201ENST00000598340 967 ntBASIC14.5□□□□□ -0.09
AP4S1Q9Y587 AC010507.1-201ENST00000633895 436 ntBASIC14.5□□□□□ -0.09
AP4S1Q9Y587 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.5□□□□□ -0.09
AP4S1Q9Y587 AC105206.1-202ENST00000314927 2368 ntBASIC14.49□□□□□ -0.09
AP4S1Q9Y587 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms