Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CYP4F24P-201ENST00000586049 1580 ntBASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 KRT18P67-201ENST00000432816 1264 ntBASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 EEF1DP4-201ENST00000446006 880 ntBASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 AC097359.3-201ENST00000603982 1210 ntBASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 AC010327.5-201ENST00000586923 3061 ntBASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
KCNIP3Q9Y2W7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 AC002056.1-201ENST00000395613 760 ntBASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 HNRNPUP1-201ENST00000554987 333 ntBASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 IFNL4P1-201ENST00000607083 540 ntBASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.86□□□□□ -0.35
KCNIP3Q9Y2W7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms