Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAPPC4Q9Y296 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAPPC4Q9Y296 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TRAPPC4Q9Y296 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.08□□□□□ -0.15
TRAPPC4Q9Y296 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 AC015910.1-201ENST00000579400 975 ntBASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 AL096865.1-201ENST00000606796 927 ntBASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 AC009118.2-201ENST00000613275 655 ntBASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 AC117489.1-201ENST00000625169 3217 ntBASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC4Q9Y296 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 BX640514.1-201ENST00000583223 1918 ntBASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 MEP1AP4-201ENST00000423244 1087 ntBASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 KRT18P64-201ENST00000434946 1219 ntBASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 KRT18P43-201ENST00000469825 1281 ntBASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 AC011467.4-201ENST00000594891 528 ntBASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC4Q9Y296 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC4Q9Y296 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAPPC4Q9Y296 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC4Q9Y296 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC4Q9Y296 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC4Q9Y296 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC4Q9Y296 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms