Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAK1Q9UPV9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC21.13■□□□□ 0.97
TRAK1Q9UPV9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAK1Q9UPV9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAK1Q9UPV9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 API5-202ENST00000420461 2009 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 AC087481.3-201ENST00000602886 1894 ntBASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 AC091046.1-201ENST00000331871 207 ntBASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 RN7SL11P-201ENST00000471305 293 ntBASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 SHC1P1-201ENST00000425230 1745 ntBASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 AC112693.3-201ENST00000624819 1983 ntBASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAK1Q9UPV9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC013355.1-201ENST00000562625 723 ntBASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC005324.6-201ENST00000587972 613 ntBASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC026740.1-201ENST00000607068 791 ntBASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC091812.3-201ENST00000621362 345 ntBASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC136621.1-201ENST00000624017 2304 ntBASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 C18orf15-201ENST00000623680 2534 ntBASIC21.11■□□□□ 0.97
TRAK1Q9UPV9 AC008132.1-202ENST00000342005 1389 ntBASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 CROCCP1-201ENST00000426910 5675 ntBASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 ELK2AP-201ENST00000392510 1007 ntBASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 RN7SL769P-201ENST00000469386 295 ntBASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 AC245884.6-201ENST00000515672 1067 ntBASIC21.1■□□□□ 0.97
TRAK1Q9UPV9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms