Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 LINC01225-203ENST00000563550 1244 ntBASIC13.68□□□□□ -0.22
NLKQ9UBE8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.68□□□□□ -0.22
NLKQ9UBE8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NLKQ9UBE8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
NLKQ9UBE8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 AC005562.1-201ENST00000583030 3219 ntBASIC13.67□□□□□ -0.22
NLKQ9UBE8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 AC005237.2-201ENST00000434368 219 ntBASIC13.67□□□□□ -0.22
NLKQ9UBE8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 AC069335.1-201ENST00000489972 472 ntBASIC13.67□□□□□ -0.22
NLKQ9UBE8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 AP000344.2-201ENST00000512987 629 ntBASIC13.67□□□□□ -0.22
NLKQ9UBE8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 AC024267.1-201ENST00000582320 895 ntBASIC13.67□□□□□ -0.22
NLKQ9UBE8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 AL513210.1-201ENST00000629608 234 ntBASIC13.67□□□□□ -0.22
NLKQ9UBE8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 AC089987.1-201ENST00000551654 2209 ntBASIC13.67□□□□□ -0.22
NLKQ9UBE8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
NLKQ9UBE8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NLKQ9UBE8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms