Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 U82695.1-201ENST00000635752 1889 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 DGCR5-201ENST00000399539 862 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 MIR4321-201ENST00000592276 80 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 SRD5A3P1-201ENST00000603021 949 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 AC004461.2-201ENST00000629517 803 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CICP17-201ENST00000418553 2377 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 AC105250.1-201ENST00000509378 2057 ntBASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 AL356585.2-201ENST00000625078 2396 ntBASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 SLC7A15P-201ENST00000424028 1363 ntBASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 AP006294.1-201ENST00000415407 339 ntBASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF4Q9BUZ4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms