Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 FO393414.2-201ENST00000405153 598 ntBASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 AC006538.3-201ENST00000612495 578 ntBASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHRDL1Q9BU40 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 CETN4P-206ENST00000642099 2168 ntBASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 STRCP1-201ENST00000509801 5328 ntBASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 Z92544.3-201ENST00000624747 417 ntBASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHRDL1Q9BU40 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms