Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL672207.1-201ENST00000328462 1570 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ABCA3Q99758 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.62■□□□□ 0.73
ABCA3Q99758 KRT17P5-201ENST00000332088 839 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 AC026470.1-201ENST00000478038 846 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 IGHV1-12-201ENST00000518307 205 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.62■□□□□ 0.73
ABCA3Q99758 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 AC005332.8-201ENST00000622750 2735 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ABCA3Q99758 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.61■□□□□ 0.73
ABCA3Q99758 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.61■□□□□ 0.73
ABCA3Q99758 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 AC106827.1-201ENST00000366454 431 ntBASIC19.61■□□□□ 0.73
ABCA3Q99758 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC19.61■□□□□ 0.73
ABCA3Q99758 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC19.61■□□□□ 0.73
ABCA3Q99758 AL135901.1-201ENST00000451812 333 ntBASIC19.61■□□□□ 0.73
ABCA3Q99758 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.61■□□□□ 0.73
ABCA3Q99758 AC055811.3-201ENST00000584952 686 ntBASIC19.61■□□□□ 0.73
ABCA3Q99758 PLS3-210ENST00000626746 216 ntTSL 4 BASIC19.61■□□□□ 0.73
ABCA3Q99758 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.61■□□□□ 0.73
ABCA3Q99758 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.61■□□□□ 0.73
ABCA3Q99758 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.61■□□□□ 0.73
ABCA3Q99758 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC19.61■□□□□ 0.73
ABCA3Q99758 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 KHSRPP1-201ENST00000427983 1768 ntBASIC19.61■□□□□ 0.73
ABCA3Q99758 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.61■□□□□ 0.73
ABCA3Q99758 AL513523.2-202ENST00000427283 2040 ntBASIC19.61■□□□□ 0.73
ABCA3Q99758 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 ZNF436-AS1-201ENST00000335648 2547 ntBASIC19.61■□□□□ 0.73
ABCA3Q99758 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCA3Q99758 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCA3Q99758 SURF4-203ENST00000371991 715 ntTSL 3 BASIC19.6■□□□□ 0.73
ABCA3Q99758 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.6■□□□□ 0.73
ABCA3Q99758 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCA3Q99758 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC19.6■□□□□ 0.73
ABCA3Q99758 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCA3Q99758 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.6■□□□□ 0.73
ABCA3Q99758 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCA3Q99758 AP005264.6-204ENST00000588436 719 ntBASIC19.6■□□□□ 0.73
ABCA3Q99758 AC087481.3-201ENST00000602886 1894 ntBASIC19.6■□□□□ 0.73
ABCA3Q99758 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
ABCA3Q99758 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
ABCA3Q99758 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ABCA3Q99758 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCA3Q99758 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ABCA3Q99758 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ABCA3Q99758 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCA3Q99758 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ABCA3Q99758 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC19.6■□□□□ 0.73
ABCA3Q99758 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCA3Q99758 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCA3Q99758 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCA3Q99758 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCA3Q99758 AC093826.1-201ENST00000508655 993 ntBASIC19.59■□□□□ 0.73
ABCA3Q99758 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ABCA3Q99758 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ABCA3Q99758 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCA3Q99758 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ABCA3Q99758 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCA3Q99758 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.59■□□□□ 0.73
ABCA3Q99758 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCA3Q99758 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCA3Q99758 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCA3Q99758 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCA3Q99758 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCA3Q99758 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.59■□□□□ 0.73
ABCA3Q99758 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC19.59■□□□□ 0.73
ABCA3Q99758 OR2A1-AS1-210ENST00000496968 531 ntBASIC19.59■□□□□ 0.73
ABCA3Q99758 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCA3Q99758 FAM86KP-201ENST00000509817 987 ntBASIC19.59■□□□□ 0.73
ABCA3Q99758 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCA3Q99758 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCA3Q99758 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.59■□□□□ 0.73
ABCA3Q99758 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms