Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDK5RAP1Q96SZ6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDK5RAP1Q96SZ6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDK5RAP1Q96SZ6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 AC099336.1-201ENST00000417053 1171 ntBASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 MIR4259-201ENST00000584466 101 ntBASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.83■□□□□ 0.12
CDK5RAP1Q96SZ6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 AC055811.4-201ENST00000624039 1754 ntBASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 AC078819.1-201ENST00000547454 765 ntBASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 AC012085.1-201ENST00000548270 765 ntBASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms