Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNX18Q96RF0 AJ011931.1-201ENST00000618749 2492 ntBASIC14.02□□□□□ -0.16
SNX18Q96RF0 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SNX18Q96RF0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.02□□□□□ -0.16
SNX18Q96RF0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SNX18Q96RF0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNX18Q96RF0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SNX18Q96RF0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SNX18Q96RF0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.02□□□□□ -0.16
SNX18Q96RF0 MYO15B-237ENST00000642007 4893 ntBASIC14.02□□□□□ -0.16
SNX18Q96RF0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.02□□□□□ -0.16
SNX18Q96RF0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SNX18Q96RF0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SNX18Q96RF0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SNX18Q96RF0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SNX18Q96RF0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 SPDYE14P-201ENST00000442619 822 ntBASIC14.02□□□□□ -0.17
SNX18Q96RF0 CNN2P2-201ENST00000443536 909 ntBASIC14.02□□□□□ -0.17
SNX18Q96RF0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 CNN2P3-201ENST00000450201 906 ntBASIC14.02□□□□□ -0.17
SNX18Q96RF0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 RN7SL828P-201ENST00000607615 303 ntBASIC14.02□□□□□ -0.17
SNX18Q96RF0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 AL136317.3-201ENST00000618497 906 ntBASIC14.02□□□□□ -0.17
SNX18Q96RF0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.02□□□□□ -0.17
SNX18Q96RF0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNX18Q96RF0 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.01□□□□□ -0.17
SNX18Q96RF0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms