Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC7Q96M83 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 TP73-213ENST00000604479 1623 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC7Q96M83 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC7Q96M83 B9D1-203ENST00000395615 805 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 KLF2P2-201ENST00000416807 1039 ntBASIC21.18■□□□□ 0.98
CCDC7Q96M83 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC7Q96M83 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 AC244093.1-201ENST00000610837 814 ntBASIC21.18■□□□□ 0.98
CCDC7Q96M83 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC7Q96M83 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC7Q96M83 AL390755.1-201ENST00000623716 2027 ntBASIC21.18■□□□□ 0.98
CCDC7Q96M83 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC7Q96M83 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 ANKRD26P3-201ENST00000454044 2748 ntBASIC21.17■□□□□ 0.98
CCDC7Q96M83 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 MSTO2P-201ENST00000314835 1709 ntBASIC21.17■□□□□ 0.98
CCDC7Q96M83 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 STK24-203ENST00000397517 4578 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 LSM5-207ENST00000410044 687 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 AC099548.2-209ENST00000480264 625 ntBASIC21.17■□□□□ 0.98
CCDC7Q96M83 AC108725.1-201ENST00000495472 409 ntBASIC21.17■□□□□ 0.98
CCDC7Q96M83 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 AC023090.2-201ENST00000625182 2110 ntBASIC21.17■□□□□ 0.98
CCDC7Q96M83 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 AC106881.1-201ENST00000605849 3329 ntBASIC21.17■□□□□ 0.98
CCDC7Q96M83 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC7Q96M83 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC7Q96M83 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 AL355864.2-201ENST00000447420 863 ntBASIC21.16■□□□□ 0.98
CCDC7Q96M83 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC7Q96M83 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC7Q96M83 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms