Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 ACTBP8-201ENST00000403258 1108 ntBASIC13.43□□□□□ -0.26
TMEM54Q969K7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 AP006294.1-201ENST00000415407 339 ntBASIC13.43□□□□□ -0.26
TMEM54Q969K7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 AC022137.2-201ENST00000503482 481 ntBASIC13.43□□□□□ -0.26
TMEM54Q969K7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 AC009486.1-201ENST00000569860 813 ntBASIC13.43□□□□□ -0.26
TMEM54Q969K7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 AC027307.3-201ENST00000594262 1100 ntBASIC13.43□□□□□ -0.26
TMEM54Q969K7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 AC098614.1-201ENST00000368528 745 ntBASIC13.42□□□□□ -0.26
TMEM54Q969K7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 GIMAP3P-201ENST00000495150 836 ntBASIC13.42□□□□□ -0.26
TMEM54Q969K7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 KRT18P25-201ENST00000508931 1278 ntBASIC13.42□□□□□ -0.26
TMEM54Q969K7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 MIR3197-201ENST00000582241 73 ntBASIC13.42□□□□□ -0.26
TMEM54Q969K7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 AC025048.6-201ENST00000634326 1161 ntBASIC13.42□□□□□ -0.26
TMEM54Q969K7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM54Q969K7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 AC099063.4-201ENST00000641099 1602 ntBASIC13.42□□□□□ -0.26
TMEM54Q969K7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM54Q969K7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms