Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HPS3Q969F9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HPS3Q969F9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HPS3Q969F9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS3Q969F9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS3Q969F9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HPS3Q969F9 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS3Q969F9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HPS3Q969F9 AC134915.1-201ENST00000426461 574 ntBASIC16.93■□□□□ 0.3
HPS3Q969F9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS3Q969F9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS3Q969F9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS3Q969F9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HPS3Q969F9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS3Q969F9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.93■□□□□ 0.3
HPS3Q969F9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HPS3Q969F9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS3Q969F9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS3Q969F9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS3Q969F9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS3Q969F9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.93■□□□□ 0.3
HPS3Q969F9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
HPS3Q969F9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS3Q969F9 AL137783.1-201ENST00000623494 1896 ntBASIC16.93■□□□□ 0.3
HPS3Q969F9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HPS3Q969F9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS3Q969F9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS3Q969F9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS3Q969F9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HPS3Q969F9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HPS3Q969F9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.92■□□□□ 0.3
HPS3Q969F9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.92■□□□□ 0.3
HPS3Q969F9 AC104596.2-201ENST00000512793 793 ntBASIC16.92■□□□□ 0.3
HPS3Q969F9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.92■□□□□ 0.3
HPS3Q969F9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
HPS3Q969F9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HPS3Q969F9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.92■□□□□ 0.3
HPS3Q969F9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.92■□□□□ 0.3
HPS3Q969F9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HPS3Q969F9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
HPS3Q969F9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
HPS3Q969F9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS3Q969F9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS3Q969F9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS3Q969F9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 SNX18-202ENST00000343017 3140 ntBASIC16.92■□□□□ 0.3
HPS3Q969F9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS3Q969F9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS3Q969F9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS3Q969F9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 AL136379.1-201ENST00000623471 2642 ntBASIC16.91■□□□□ 0.3
HPS3Q969F9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HPS3Q969F9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HPS3Q969F9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS3Q969F9 C1QBPP1-201ENST00000400117 770 ntBASIC16.91■□□□□ 0.3
HPS3Q969F9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms