Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 KRT18P36-201ENST00000411618 1276 ntBASIC18.24■□□□□ 0.51
SNED1Q8TER0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 AC005632.3-201ENST00000605544 308 ntBASIC18.24■□□□□ 0.51
SNED1Q8TER0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 MIR557-201ENST00000385239 98 ntBASIC18.23■□□□□ 0.51
SNED1Q8TER0 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 AC103810.10-201ENST00000606504 343 ntBASIC18.23■□□□□ 0.51
SNED1Q8TER0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 LINC01165-201ENST00000445190 1623 ntBASIC18.23■□□□□ 0.51
SNED1Q8TER0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 FAM90A2P-201ENST00000511144 1395 ntBASIC18.23■□□□□ 0.51
SNED1Q8TER0 FAM90A25P-201ENST00000528404 1395 ntBASIC18.23■□□□□ 0.51
SNED1Q8TER0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 RPL18AP3-201ENST00000462885 528 ntBASIC18.23■□□□□ 0.51
SNED1Q8TER0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 AP002803.1-201ENST00000528836 498 ntBASIC18.23■□□□□ 0.51
SNED1Q8TER0 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNED1Q8TER0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SNED1Q8TER0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 RPS9P1-201ENST00000419943 583 ntBASIC18.22■□□□□ 0.51
SNED1Q8TER0 RPL8P2-201ENST00000430538 502 ntBASIC18.22■□□□□ 0.51
SNED1Q8TER0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 POU5F1P2-201ENST00000521750 823 ntBASIC18.22■□□□□ 0.51
SNED1Q8TER0 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms