Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 KRT8P14-201ENST00000414254 1442 ntBASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 C2orf27AP3-201ENST00000434123 579 ntBASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 Z93015.1-201ENST00000451718 390 ntBASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 AL590640.2-201ENST00000457038 527 ntBASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 DUX4L47-201ENST00000566374 394 ntBASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 MIR4722-201ENST00000578292 60 ntBASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 AL354718.3-201ENST00000616414 581 ntBASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 CR382287.1-201ENST00000623954 586 ntBASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 KRT8P35-201ENST00000483942 1338 ntBASIC17.97■□□□□ 0.47
NKX2-3Q8TAU0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 ACTBP8-201ENST00000403258 1108 ntBASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 AP003171.2-201ENST00000528208 925 ntBASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 AL008638.5-201ENST00000623814 1298 ntBASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX2-3Q8TAU0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.96■□□□□ 0.46
NKX2-3Q8TAU0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms