Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 AZGP1P1-201ENST00000411909 902 ntBASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 RFPL4AP1-201ENST00000530883 850 ntBASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 AL450472.2-201ENST00000603663 1156 ntBASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 AC005840.4-201ENST00000541242 2494 ntBASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.6■□□□□ 0.09
CFAP61Q8NHU2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 PHKG1P2-201ENST00000457537 863 ntBASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 AC027796.2-201ENST00000575326 344 ntBASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 AL390754.1-201ENST00000619088 582 ntBASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 AC092127.1-201ENST00000567093 3455 ntBASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 AJ011931.1-201ENST00000618749 2492 ntBASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.59■□□□□ 0.09
CFAP61Q8NHU2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 AC126365.1-201ENST00000578585 1514 ntBASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 AC006504.5-208ENST00000588784 2401 ntBASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CFAP61Q8NHU2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms