Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 KLF2P1-201ENST00000447438 1042 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 AC078925.2-201ENST00000624013 1973 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A7P-201ENST00000382628 1395 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A23P-201ENST00000400136 1395 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A21P-201ENST00000510875 1396 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A15P-201ENST00000514465 1395 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A6P-201ENST00000515148 1394 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A16P-201ENST00000526662 1395 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A9P-201ENST00000527940 1395 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A5P-201ENST00000528738 1395 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A14P-201ENST00000530386 1395 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 FAM90A13P-201ENST00000534703 1395 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 AC244394.1-201ENST00000435000 1665 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 Z69890.1-201ENST00000382990 339 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 AL583805.1-201ENST00000391389 531 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 AC008723.1-201ENST00000506922 207 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 AP000911.2-201ENST00000534330 502 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 AL109837.1-201ENST00000603272 613 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 AL008718.2-201ENST00000609206 1313 ntBASIC12.63□□□□□ -0.39
CCDC168Q8NDH2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 AC011840.2-201ENST00000563063 1520 ntBASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PUDPP3-201ENST00000445368 636 ntBASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 AP005212.2-201ENST00000584979 510 ntBASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 AL139339.2-201ENST00000608063 657 ntBASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 AC002472.3-201ENST00000640124 621 ntBASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 AC092364.2-201ENST00000596710 2692 ntBASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms