Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 AC020658.6-201ENST00000623564 1870 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 AL023775.1-201ENST00000454907 1746 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 AC063926.3-201ENST00000624734 5658 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 AC006033.1-201ENST00000440505 426 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 MTX1P1-201ENST00000440904 838 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 AL391280.1-201ENST00000506969 1062 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 COX5BP1-201ENST00000507622 393 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 OR10B1P-201ENST00000601666 907 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 AL096828.3-201ENST00000615354 462 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 REXO1L4P-201ENST00000605109 1937 ntBASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC38A9Q8NBW4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 GHSR-202ENST00000427970 912 ntBASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AC026434.2-201ENST00000506094 1078 ntBASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AC104982.3-201ENST00000581995 514 ntBASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AC073413.1-201ENST00000603927 732 ntBASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AL008638.5-201ENST00000623814 1298 ntBASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 AL133338.1-201ENST00000565695 1517 ntBASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 CLUHP2-201ENST00000426660 1303 ntBASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC38A9Q8NBW4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms