Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 BX088702.1-201ENST00000610784 235 ntBASIC23.51■■□□□ 1.35
VPS8Q8N3P4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 POR-201ENST00000394893 2532 ntTSL 5 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 MIR6799-201ENST00000620297 69 ntBASIC23.5■■□□□ 1.35
VPS8Q8N3P4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 KC6-205ENST00000599934 556 ntTSL 4 BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 AC091271.1-201ENST00000611877 1162 ntBASIC23.5■■□□□ 1.35
VPS8Q8N3P4 AL136301.1-201ENST00000615830 422 ntBASIC23.5■■□□□ 1.35
VPS8Q8N3P4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VPS8Q8N3P4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 AC013726.1-201ENST00000563747 2285 ntBASIC23.49■■□□□ 1.35
VPS8Q8N3P4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 AC006058.4-201ENST00000624016 1670 ntBASIC23.49■■□□□ 1.35
VPS8Q8N3P4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 E2F3P2-201ENST00000447755 1422 ntBASIC23.49■■□□□ 1.35
VPS8Q8N3P4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 MIR1247-201ENST00000408206 136 ntBASIC23.49■■□□□ 1.35
VPS8Q8N3P4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 POM121L10P-201ENST00000436994 1285 ntBASIC23.49■■□□□ 1.35
VPS8Q8N3P4 PUDPP3-201ENST00000445368 636 ntBASIC23.49■■□□□ 1.35
VPS8Q8N3P4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 RN7SL219P-201ENST00000582872 296 ntBASIC23.49■■□□□ 1.35
VPS8Q8N3P4 AL162426.1-201ENST00000624141 743 ntBASIC23.49■■□□□ 1.35
VPS8Q8N3P4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC23.49■■□□□ 1.35
VPS8Q8N3P4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
VPS8Q8N3P4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS8Q8N3P4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms