Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 AL359881.2-201ENST00000602973 570 ntBASIC15.08■□□□□ 0
TRIM48Q8IWZ4 AL022328.1-201ENST00000610050 478 ntBASIC15.08■□□□□ 0
TRIM48Q8IWZ4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 AC126177.1-201ENST00000547829 2218 ntBASIC15.08■□□□□ 0
TRIM48Q8IWZ4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 AC099063.4-201ENST00000641099 1602 ntBASIC15.07■□□□□ 0
TRIM48Q8IWZ4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 ARSEP1-201ENST00000420443 635 ntBASIC15.07■□□□□ 0
TRIM48Q8IWZ4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM48Q8IWZ4 AC084364.1-201ENST00000551967 1556 ntBASIC15.07■□□□□ 0
TRIM48Q8IWZ4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 AL138799.1-201ENST00000448213 1675 ntBASIC15.06■□□□□ 0
TRIM48Q8IWZ4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms