Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CRLF3Q8IUI8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CRLF3Q8IUI8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.38■□□□□ 0.05
CRLF3Q8IUI8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CRLF3Q8IUI8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 AC006504.5-208ENST00000588784 2401 ntBASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 GPS2P2-201ENST00000430745 888 ntBASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 RBPMS2P1-201ENST00000437762 623 ntBASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 EEF1DP4-201ENST00000446006 880 ntBASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 AC093512.1-201ENST00000617969 520 ntBASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 AC008267.7-201ENST00000624570 1194 ntBASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 FOXO1B-201ENST00000504678 1527 ntBASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.37■□□□□ 0.05
CRLF3Q8IUI8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 FAM86GP-201ENST00000448322 971 ntBASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 Z92544.3-201ENST00000624747 417 ntBASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 AC084364.1-201ENST00000551967 1556 ntBASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CRLF3Q8IUI8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms