Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 HIST2H2BA-201ENST00000412169 381 ntBASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13BQ7Z7G8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 PUDPP3-201ENST00000445368 636 ntBASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 AL136295.7-201ENST00000619226 1200 ntBASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 AC244394.1-201ENST00000435000 1665 ntBASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 AL512306.1-201ENST00000432698 848 ntBASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 VDAC1P1-201ENST00000439229 848 ntBASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 RBM8B-201ENST00000555532 525 ntBASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13BQ7Z7G8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 RPL8P2-201ENST00000430538 502 ntBASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 POLD4-208ENST00000532830 904 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 DNM1P51-201ENST00000558149 522 ntBASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 NAT9-220ENST00000582870 896 ntTSL 5 BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13BQ7Z7G8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms