Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 AL928921.2-201ENST00000641325 2442 ntBASIC13.9□□□□□ -0.18
SHFQ7M4L6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SHFQ7M4L6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
SHFQ7M4L6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SHFQ7M4L6 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SHFQ7M4L6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 SPDYE17-201ENST00000412399 783 ntBASIC13.89□□□□□ -0.19
SHFQ7M4L6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 DNAJB3-201ENST00000446806 729 ntBASIC13.89□□□□□ -0.19
SHFQ7M4L6 POLD2P1-201ENST00000511220 997 ntBASIC13.89□□□□□ -0.19
SHFQ7M4L6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 AC022145.2-201ENST00000598203 171 ntBASIC13.89□□□□□ -0.19
SHFQ7M4L6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHFQ7M4L6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SHFQ7M4L6 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AC010327.5-201ENST00000586923 3061 ntBASIC13.88□□□□□ -0.19
SHFQ7M4L6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AL035456.1-201ENST00000456064 1369 ntBASIC13.88□□□□□ -0.19
SHFQ7M4L6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms