Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 BAATP1-201ENST00000412284 1225 ntBASIC14.68□□□□□ -0.06
RNF44Q7L0R7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 AC233724.13-201ENST00000598383 410 ntBASIC14.68□□□□□ -0.06
RNF44Q7L0R7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF44Q7L0R7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 MSTO2P-201ENST00000314835 1709 ntBASIC14.67□□□□□ -0.06
RNF44Q7L0R7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 RNU1-114P-201ENST00000365297 166 ntBASIC14.67□□□□□ -0.06
RNF44Q7L0R7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
RNF44Q7L0R7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 AL158070.2-201ENST00000623713 1621 ntBASIC14.66□□□□□ -0.06
RNF44Q7L0R7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF44Q7L0R7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms