Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC8.34□□□□□ -1.07
LCA10Q71F78 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC8.34□□□□□ -1.07
LCA10Q71F78 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC8.34□□□□□ -1.07
LCA10Q71F78 CDC14C-201ENST00000428251 1719 ntBASIC8.34□□□□□ -1.07
LCA10Q71F78 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC8.34□□□□□ -1.07
LCA10Q71F78 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC8.34□□□□□ -1.07
LCA10Q71F78 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LCA10Q71F78 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
LCA10Q71F78 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC8.34□□□□□ -1.08
LCA10Q71F78 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC8.33□□□□□ -1.08
LCA10Q71F78 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 PCDHB18P-202ENST00000526308 3197 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC8.33□□□□□ -1.08
LCA10Q71F78 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
LCA10Q71F78 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
LCA10Q71F78 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 AP002414.1-201ENST00000391405 1147 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 FXN-203ENST00000396366 922 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 RCN1P2-201ENST00000398357 915 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 NABP1-203ENST00000409510 843 ntTSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 LINC00982-205ENST00000420957 435 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 SUPT20HL1-201ENST00000436466 2618 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC8.33□□□□□ -1.08
LCA10Q71F78 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC8.33□□□□□ -1.08
LCA10Q71F78 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC8.33□□□□□ -1.08
LCA10Q71F78 BNIP3P18-201ENST00000593976 575 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 AC130686.1-201ENST00000622936 2466 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 NSUN5P1-202ENST00000421140 1535 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 NSUN5P2-203ENST00000457352 1529 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 AC016734.2-201ENST00000624325 1377 ntBASIC8.33□□□□□ -1.08
LCA10Q71F78 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 OS9-218ENST00000551035 2246 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC8.33□□□□□ -1.08
LCA10Q71F78 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
LCA10Q71F78 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LCA10Q71F78 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms