Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 TMBIM7P-203ENST00000641617 1718 ntBASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 FAM58DP-201ENST00000428076 619 ntBASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AL353705.2-201ENST00000428243 662 ntBASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AC061975.2-201ENST00000581722 295 ntBASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AC139530.3-201ENST00000620344 690 ntBASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 AC091951.1-201ENST00000512854 2465 ntBASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 SPDYE7P-202ENST00000420373 878 ntBASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM53Q6P2H8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TMEM53Q6P2H8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms