Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 SPDYE18-201ENST00000510091 1050 ntBASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKAL1Q5VV42 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 BTBD7P1-201ENST00000447253 1453 ntBASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 AC026410.3-201ENST00000514280 936 ntBASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 AC025678.2-201ENST00000562061 970 ntBASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CDKAL1Q5VV42 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKAL1Q5VV42 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms