Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 HYMAI-201ENST00000635591 3347 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 AC079328.2-201ENST00000561241 3354 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 ISCA2P1-201ENST00000425548 448 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 AC098935.1-201ENST00000446057 611 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 FGFR3P1-201ENST00000449999 601 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 NOC2LP1-201ENST00000450578 752 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 RTN3P1-201ENST00000536295 711 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 MIR4683-201ENST00000579659 81 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 MIR4783-201ENST00000580343 82 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 AC004466.1-201ENST00000599515 1080 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 AL136301.1-201ENST00000615830 422 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC93Q567U6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC93Q567U6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.62■□□□□ 0.57
CCDC93Q567U6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 IGLV3-15-201ENST00000518356 244 ntBASIC18.61■□□□□ 0.57
CCDC93Q567U6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 AC009955.4-201ENST00000597192 544 ntBASIC18.61■□□□□ 0.57
CCDC93Q567U6 RN7SL736P-201ENST00000613111 269 ntBASIC18.61■□□□□ 0.57
CCDC93Q567U6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC93Q567U6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC93Q567U6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC93Q567U6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC93Q567U6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms