Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.95■□□□□ 0.94
CDCA8Q53HL2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA8Q53HL2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA8Q53HL2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 RN7SL713P-201ENST00000582127 302 ntBASIC20.94■□□□□ 0.94
CDCA8Q53HL2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 AL033527.4-201ENST00000641026 673 ntBASIC20.94■□□□□ 0.94
CDCA8Q53HL2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 AC013268.4-201ENST00000637413 2228 ntBASIC20.94■□□□□ 0.94
CDCA8Q53HL2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA8Q53HL2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 TLE1P1-201ENST00000422965 589 ntBASIC20.93■□□□□ 0.94
CDCA8Q53HL2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 AC007274.1-201ENST00000439805 662 ntBASIC20.93■□□□□ 0.94
CDCA8Q53HL2 CNN2P10-201ENST00000443067 918 ntBASIC20.93■□□□□ 0.94
CDCA8Q53HL2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 AP000593.2-201ENST00000542775 1433 ntBASIC20.93■□□□□ 0.94
CDCA8Q53HL2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 AC068587.6-202ENST00000641839 5619 ntBASIC20.93■□□□□ 0.94
CDCA8Q53HL2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.93■□□□□ 0.94
CDCA8Q53HL2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 AC092384.3-202ENST00000564646 2873 ntBASIC20.92■□□□□ 0.94
CDCA8Q53HL2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 AL355994.2-201ENST00000447882 704 ntBASIC20.92■□□□□ 0.94
CDCA8Q53HL2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 COX5BP1-201ENST00000507622 393 ntBASIC20.92■□□□□ 0.94
CDCA8Q53HL2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 OR10B1P-201ENST00000601666 907 ntBASIC20.92■□□□□ 0.94
CDCA8Q53HL2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms