Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 AL022328.1-201ENST00000610050 478 ntBASIC19.79■□□□□ 0.76
CCDC27Q2M243 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 DBET-201ENST00000630918 3363 ntBASIC19.79■□□□□ 0.76
CCDC27Q2M243 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC27Q2M243 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 AC245100.3-201ENST00000441281 285 ntBASIC19.78■□□□□ 0.76
CCDC27Q2M243 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 MESTP3-201ENST00000503460 968 ntBASIC19.78■□□□□ 0.76
CCDC27Q2M243 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 ENPP7P14-201ENST00000621765 1040 ntBASIC19.78■□□□□ 0.76
CCDC27Q2M243 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 AC018665.1-201ENST00000622927 1362 ntBASIC19.78■□□□□ 0.76
CCDC27Q2M243 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC27Q2M243 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC27Q2M243 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 CNN2P8-201ENST00000421872 913 ntBASIC19.77■□□□□ 0.76
CCDC27Q2M243 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 KRT17P7-201ENST00000451704 1104 ntBASIC19.77■□□□□ 0.76
CCDC27Q2M243 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC27Q2M243 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC27Q2M243 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC27Q2M243 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC27Q2M243 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC27Q2M243 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CCDC27Q2M243 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC27Q2M243 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC27Q2M243 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms