Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.85■□□□□ 0.77
COL16A1Q07092 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
COL16A1Q07092 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 KRT8P28-201ENST00000433288 1390 ntBASIC19.85■□□□□ 0.77
COL16A1Q07092 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL16A1Q07092 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.85■□□□□ 0.77
COL16A1Q07092 AC013726.1-201ENST00000563747 2285 ntBASIC19.85■□□□□ 0.77
COL16A1Q07092 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.84■□□□□ 0.77
COL16A1Q07092 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL16A1Q07092 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 AC113347.2-201ENST00000512350 279 ntBASIC19.84■□□□□ 0.77
COL16A1Q07092 CASP3-205ENST00000517513 964 ntTSL 5 BASIC19.84■□□□□ 0.77
COL16A1Q07092 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC19.84■□□□□ 0.77
COL16A1Q07092 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL16A1Q07092 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.84■□□□□ 0.77
COL16A1Q07092 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.84■□□□□ 0.77
COL16A1Q07092 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.84■□□□□ 0.77
COL16A1Q07092 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.84■□□□□ 0.77
COL16A1Q07092 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.84■□□□□ 0.77
COL16A1Q07092 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC19.84■□□□□ 0.77
COL16A1Q07092 EEF1DP5-201ENST00000431410 772 ntBASIC19.84■□□□□ 0.77
COL16A1Q07092 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 AC092896.1-201ENST00000465850 380 ntBASIC19.84■□□□□ 0.77
COL16A1Q07092 AC092612.1-201ENST00000514501 998 ntBASIC19.84■□□□□ 0.77
COL16A1Q07092 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC19.84■□□□□ 0.77
COL16A1Q07092 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC19.84■□□□□ 0.77
COL16A1Q07092 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.84■□□□□ 0.77
COL16A1Q07092 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL16A1Q07092 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL16A1Q07092 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
COL16A1Q07092 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.83■□□□□ 0.77
COL16A1Q07092 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL16A1Q07092 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL16A1Q07092 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL16A1Q07092 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.83■□□□□ 0.77
COL16A1Q07092 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL16A1Q07092 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL16A1Q07092 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.83■□□□□ 0.76
COL16A1Q07092 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
COL16A1Q07092 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC19.83■□□□□ 0.76
COL16A1Q07092 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.83■□□□□ 0.76
COL16A1Q07092 SOD2-205ENST00000444946 917 ntTSL 2 BASIC19.83■□□□□ 0.76
COL16A1Q07092 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC19.83■□□□□ 0.76
COL16A1Q07092 SCARNA12-201ENST00000459155 270 ntBASIC19.83■□□□□ 0.76
COL16A1Q07092 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
COL16A1Q07092 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.83■□□□□ 0.76
COL16A1Q07092 AL160191.2-201ENST00000603975 601 ntBASIC19.83■□□□□ 0.76
COL16A1Q07092 RARS-210ENST00000626454 177 ntTSL 5 BASIC19.83■□□□□ 0.76
COL16A1Q07092 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.83■□□□□ 0.76
COL16A1Q07092 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.83■□□□□ 0.76
COL16A1Q07092 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL16A1Q07092 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.82■□□□□ 0.76
COL16A1Q07092 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC19.82■□□□□ 0.76
COL16A1Q07092 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
COL16A1Q07092 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COL16A1Q07092 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.82■□□□□ 0.76
COL16A1Q07092 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.82■□□□□ 0.76
COL16A1Q07092 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC19.82■□□□□ 0.76
COL16A1Q07092 RN7SL288P-201ENST00000490496 291 ntBASIC19.82■□□□□ 0.76
COL16A1Q07092 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.82■□□□□ 0.76
COL16A1Q07092 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.82■□□□□ 0.76
COL16A1Q07092 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC19.82■□□□□ 0.76
COL16A1Q07092 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms