Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AC105021.1-202ENST00000570572 669 ntBASIC11.81□□□□□ -0.52
HIST1H1AQ02539 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AC004835.2-201ENST00000603762 682 ntBASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AC018529.1-201ENST00000613063 361 ntBASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AL513210.1-201ENST00000629608 234 ntBASIC11.81□□□□□ -0.52
HIST1H1AQ02539 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AC084121.4-201ENST00000641598 221 ntBASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AF228730.8-201ENST00000642140 221 ntBASIC11.81□□□□□ -0.52
HIST1H1AQ02539 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AC148477.4-201ENST00000613430 1793 ntBASIC11.81□□□□□ -0.52
HIST1H1AQ02539 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 AZGP1P1-201ENST00000411909 902 ntBASIC11.8□□□□□ -0.52
HIST1H1AQ02539 AC004461.1-201ENST00000412461 403 ntBASIC11.8□□□□□ -0.52
HIST1H1AQ02539 BX842568.4-201ENST00000421222 227 ntBASIC11.8□□□□□ -0.52
HIST1H1AQ02539 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 EEF1DP4-201ENST00000446006 880 ntBASIC11.8□□□□□ -0.52
HIST1H1AQ02539 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 AL671883.3-201ENST00000603274 991 ntBASIC11.8□□□□□ -0.52
HIST1H1AQ02539 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms