Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HOXC5Q00444 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.22□□□□□ -0.13
HOXC5Q00444 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.22□□□□□ -0.13
HOXC5Q00444 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.22□□□□□ -0.13
HOXC5Q00444 SDHAP3-202ENST00000515467 728 ntBASIC14.22□□□□□ -0.13
HOXC5Q00444 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.22□□□□□ -0.13
HOXC5Q00444 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HOXC5Q00444 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.22□□□□□ -0.13
HOXC5Q00444 DUX4L27-201ENST00000554796 1261 ntBASIC14.22□□□□□ -0.13
HOXC5Q00444 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.22□□□□□ -0.13
HOXC5Q00444 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 AL844908.2-201ENST00000609461 460 ntBASIC14.22□□□□□ -0.13
HOXC5Q00444 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HOXC5Q00444 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HOXC5Q00444 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HOXC5Q00444 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HOXC5Q00444 WASH3P-207ENST00000560956 1394 ntBASIC14.22□□□□□ -0.13
HOXC5Q00444 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC5Q00444 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HOXC5Q00444 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HOXC5Q00444 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXC5Q00444 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.21□□□□□ -0.13
HOXC5Q00444 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HOXC5Q00444 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HOXC5Q00444 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HOXC5Q00444 AL133267.1-201ENST00000398220 340 ntBASIC14.21□□□□□ -0.13
HOXC5Q00444 MIR943-201ENST00000401286 94 ntBASIC14.21□□□□□ -0.13
HOXC5Q00444 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXC5Q00444 FAM86GP-201ENST00000448322 971 ntBASIC14.21□□□□□ -0.13
HOXC5Q00444 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.21□□□□□ -0.13
HOXC5Q00444 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXC5Q00444 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXC5Q00444 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXC5Q00444 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXC5Q00444 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXC5Q00444 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HOXC5Q00444 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HOXC5Q00444 AC100757.3-201ENST00000622361 1406 ntBASIC14.21□□□□□ -0.13
HOXC5Q00444 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.21□□□□□ -0.14
HOXC5Q00444 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.21□□□□□ -0.14
HOXC5Q00444 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HOXC5Q00444 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HOXC5Q00444 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.21□□□□□ -0.14
HOXC5Q00444 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
HOXC5Q00444 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HOXC5Q00444 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXC5Q00444 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXC5Q00444 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXC5Q00444 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HOXC5Q00444 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
HOXC5Q00444 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC5Q00444 AC087499.5-201ENST00000452760 1342 ntBASIC14.2□□□□□ -0.14
HOXC5Q00444 KRT18P28-201ENST00000453838 1332 ntBASIC14.2□□□□□ -0.14
HOXC5Q00444 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXC5Q00444 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.2□□□□□ -0.14
HOXC5Q00444 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC5Q00444 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC5Q00444 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HOXC5Q00444 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXC5Q00444 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.2□□□□□ -0.14
HOXC5Q00444 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HOXC5Q00444 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.2□□□□□ -0.14
HOXC5Q00444 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC5Q00444 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC5Q00444 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC5Q00444 METTL21AP1-201ENST00000438852 635 ntBASIC14.2□□□□□ -0.14
HOXC5Q00444 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.2□□□□□ -0.14
HOXC5Q00444 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.2□□□□□ -0.14
HOXC5Q00444 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HOXC5Q00444 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.2□□□□□ -0.14
HOXC5Q00444 IGHV3-42-201ENST00000520410 361 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms