Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 MEP1AP4-201ENST00000423244 1087 ntBASIC17.09■□□□□ 0.33
ASIC1P78348 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.09■□□□□ 0.33
ASIC1P78348 AC093004.1-201ENST00000508850 424 ntBASIC17.09■□□□□ 0.33
ASIC1P78348 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.09■□□□□ 0.33
ASIC1P78348 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.09■□□□□ 0.33
ASIC1P78348 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.09■□□□□ 0.33
ASIC1P78348 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ASIC1P78348 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ASIC1P78348 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ASIC1P78348 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ASIC1P78348 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.08■□□□□ 0.33
ASIC1P78348 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ASIC1P78348 AC097376.2-205ENST00000610159 5334 ntBASIC17.08■□□□□ 0.33
ASIC1P78348 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ASIC1P78348 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.08■□□□□ 0.33
ASIC1P78348 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ASIC1P78348 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ASIC1P78348 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ASIC1P78348 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ASIC1P78348 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
ASIC1P78348 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ASIC1P78348 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ASIC1P78348 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.08■□□□□ 0.32
ASIC1P78348 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.08■□□□□ 0.32
ASIC1P78348 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.08■□□□□ 0.32
ASIC1P78348 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.08■□□□□ 0.32
ASIC1P78348 SERBP1P5-201ENST00000510079 1181 ntBASIC17.08■□□□□ 0.32
ASIC1P78348 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.08■□□□□ 0.32
ASIC1P78348 AC055876.2-201ENST00000531834 546 ntBASIC17.08■□□□□ 0.32
ASIC1P78348 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.08■□□□□ 0.32
ASIC1P78348 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.08■□□□□ 0.32
ASIC1P78348 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 AC009118.2-201ENST00000613275 655 ntBASIC17.08■□□□□ 0.32
ASIC1P78348 AL662799.1-202ENST00000614205 422 ntBASIC17.08■□□□□ 0.32
ASIC1P78348 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.08■□□□□ 0.32
ASIC1P78348 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.08■□□□□ 0.32
ASIC1P78348 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ASIC1P78348 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ASIC1P78348 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.08■□□□□ 0.32
ASIC1P78348 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.08■□□□□ 0.32
ASIC1P78348 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ASIC1P78348 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ASIC1P78348 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ASIC1P78348 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ASIC1P78348 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ASIC1P78348 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ASIC1P78348 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ASIC1P78348 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.07■□□□□ 0.32
ASIC1P78348 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ASIC1P78348 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ASIC1P78348 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ASIC1P78348 AC007787.1-201ENST00000588095 1583 ntBASIC17.07■□□□□ 0.32
ASIC1P78348 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
ASIC1P78348 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ASIC1P78348 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.07■□□□□ 0.32
ASIC1P78348 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ASIC1P78348 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms