Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.68□□□□□ -0.22
ACTA1P68133 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.68□□□□□ -0.22
ACTA1P68133 AL671883.3-201ENST00000603274 991 ntBASIC13.68□□□□□ -0.22
ACTA1P68133 AC025181.2-201ENST00000606994 802 ntBASIC13.68□□□□□ -0.22
ACTA1P68133 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.68□□□□□ -0.22
ACTA1P68133 MIR6069-201ENST00000620069 79 ntBASIC13.68□□□□□ -0.22
ACTA1P68133 C20orf181-201ENST00000623918 480 ntBASIC13.68□□□□□ -0.22
ACTA1P68133 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.68□□□□□ -0.22
ACTA1P68133 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ACTA1P68133 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ACTA1P68133 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ACTA1P68133 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
ACTA1P68133 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.68□□□□□ -0.22
ACTA1P68133 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ACTA1P68133 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.68□□□□□ -0.22
ACTA1P68133 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.67□□□□□ -0.22
ACTA1P68133 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.67□□□□□ -0.22
ACTA1P68133 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 AC027601.5-201ENST00000624065 2482 ntBASIC13.67□□□□□ -0.22
ACTA1P68133 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 AC015802.1-201ENST00000588104 1449 ntBASIC13.67□□□□□ -0.22
ACTA1P68133 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 AC015656.1-201ENST00000624209 3578 ntBASIC13.67□□□□□ -0.22
ACTA1P68133 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.67□□□□□ -0.22
ACTA1P68133 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.67□□□□□ -0.22
ACTA1P68133 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.67□□□□□ -0.22
ACTA1P68133 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.67□□□□□ -0.22
ACTA1P68133 AC007967.4-201ENST00000614700 386 ntBASIC13.67□□□□□ -0.22
ACTA1P68133 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ACTA1P68133 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ACTA1P68133 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.67□□□□□ -0.22
ACTA1P68133 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.67□□□□□ -0.22
ACTA1P68133 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
ACTA1P68133 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ACTA1P68133 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.66□□□□□ -0.22
ACTA1P68133 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
ACTA1P68133 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
ACTA1P68133 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.66□□□□□ -0.22
ACTA1P68133 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
ACTA1P68133 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.66□□□□□ -0.22
ACTA1P68133 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ACTA1P68133 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.66□□□□□ -0.22
ACTA1P68133 Z97205.2-201ENST00000564697 1639 ntBASIC13.66□□□□□ -0.22
ACTA1P68133 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ACTA1P68133 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 KRT18P32-201ENST00000424695 1287 ntBASIC13.66□□□□□ -0.22
ACTA1P68133 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms